STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU86502.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (297 aa)    
Predicted Functional Partners:
SFU86473.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 0.999
SFU86481.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.999
SFU86494.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.999
SFU86522.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.999
SFU76675.1
Sn-glycerol 3-phosphate transport system permease protein.
 0.980
SFU76703.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 0.955
SFU86512.1
Predicted small integral membrane protein.
 
    0.955
SFU81010.1
Multiple sugar transport system substrate-binding protein.
 
 0.948
SFU76688.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.945
SFU31571.1
Transcriptional regulator, DeoR family.
 
   
 0.642
Your Current Organism:
Halomonas korlensis
NCBI taxonomy Id: 463301
Other names: CGMCC 1.6981, DSM 19633, H. korlensis, Halomonas korlensis Li et al. 2008, strain XK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.