STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lgor_0059Lipase LipA (L, pneumophila). (293 aa)    
Predicted Functional Partners:
Lgor_0655
acyl-CoA synthetase.
 
 0.956
Lgor_0477
acyl-CoA synthetase.
   
 0.784
pksL_4
Polyketide synthase.
  
 0.739
pksJ_1
Polyketide synthase, type I.
 
 0.718
Lgor_0058
Endonuclease/exonuclease/phosphatase family protein.
       0.709
lgrD_2
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.651
yecD
Isochorismatase.
  
 0.642
pdhB_1
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
 
  
  0.603
aidB
acyl-CoA dehydrogenase.
  
 
  0.539
Lgor_2362
Putative Carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     
  0.539
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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