STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE_1Tfp pilus assembly protein, major type IV pilin class A. (141 aa)    
Predicted Functional Partners:
Lgor_0075
General secretion pathway, M protein.
 
   
 0.825
lspD_1
Type II protein secretion LspD.
 
  
 0.822
Lgor_0077
Hypothetical protein.
 
     0.822
lspE_1
Type II protein secretion ATPase LspE.
 
  0.775
pilC_1
Pilus assembly protein PilC.
 
    0.720
lspJ
Type II secretory pathway protein LspJ.
   
 0.711
pilE_3
Tfp pilus assembly protein, major type IV pilin class A; Belongs to the N-Me-Phe pilin family.
  
 
 
0.686
lspE_2
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  0.651
pilB
Pilus assembly protein PilB.
  
  0.651
lspK
Type II secretory pathway protein LspK.
  
 
 0.641
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.