STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqiCMembrane fusogenic activity. (85 aa)    
Predicted Functional Partners:
yifB
Bifunctional enzyme and transcriptional regulator.
       0.753
glnK
Carbamoylphosphate synthase large subunit; Belongs to the P(II) protein family.
     
 0.745
Lgor_2096
SCP-2 sterol transfer family protein.
  
   
 0.723
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.563
mreD
Rod shape-determining protein MreD.
  
     0.549
Lgor_1128
Hypothetical protein; Belongs to the UPF0149 family.
  
    0.514
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.456
pilF
Twitching motility protein PilF.
  
     0.445
Lgor_2299
Zinc-finger domain protein.
  
     0.442
secE
Preprotein translocase secE subunit.
  
     0.432
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.