Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0118 | Lgor_0395 | Lgor_0118 | Lgor_0395 | Acid phosphatase, class B. | CBS domain protein. | 0.440 |
Lgor_0118 | Lgor_0823 | Lgor_0118 | Lgor_0823 | Acid phosphatase, class B. | Hypothetical protein. | 0.637 |
Lgor_0118 | Lgor_1278 | Lgor_0118 | Lgor_1278 | Acid phosphatase, class B. | Hypothetical protein. | 0.553 |
Lgor_0118 | Lgor_1796 | Lgor_0118 | Lgor_1796 | Acid phosphatase, class B. | Hypothetical protein. | 0.544 |
Lgor_0118 | Lgor_1979 | Lgor_0118 | Lgor_1979 | Acid phosphatase, class B. | Hypothetical protein. | 0.454 |
Lgor_0118 | add_1 | Lgor_0118 | Lgor_0040 | Acid phosphatase, class B. | Adenosine deaminase. | 0.547 |
Lgor_0118 | add_4 | Lgor_0118 | Lgor_2907 | Acid phosphatase, class B. | Adenosine deaminase. | 0.518 |
Lgor_0118 | kdsD | Lgor_0118 | Lgor_1837 | Acid phosphatase, class B. | Arabinose 5-phosphate isomerase. | 0.436 |
Lgor_0118 | pdc | Lgor_0118 | Lgor_1082 | Acid phosphatase, class B. | Pyruvate decarboxylase. | 0.614 |
Lgor_0118 | xapA | Lgor_0118 | Lgor_2678 | Acid phosphatase, class B. | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.656 |
Lgor_0395 | Lgor_0118 | Lgor_0395 | Lgor_0118 | CBS domain protein. | Acid phosphatase, class B. | 0.440 |
Lgor_0823 | Lgor_0118 | Lgor_0823 | Lgor_0118 | Hypothetical protein. | Acid phosphatase, class B. | 0.637 |
Lgor_0823 | Lgor_1796 | Lgor_0823 | Lgor_1796 | Hypothetical protein. | Hypothetical protein. | 0.480 |
Lgor_0823 | add_4 | Lgor_0823 | Lgor_2907 | Hypothetical protein. | Adenosine deaminase. | 0.461 |
Lgor_0823 | pdc | Lgor_0823 | Lgor_1082 | Hypothetical protein. | Pyruvate decarboxylase. | 0.612 |
Lgor_1278 | Lgor_0118 | Lgor_1278 | Lgor_0118 | Hypothetical protein. | Acid phosphatase, class B. | 0.553 |
Lgor_1278 | Lgor_1796 | Lgor_1278 | Lgor_1796 | Hypothetical protein. | Hypothetical protein. | 0.771 |
Lgor_1278 | Lgor_1979 | Lgor_1278 | Lgor_1979 | Hypothetical protein. | Hypothetical protein. | 0.761 |
Lgor_1278 | pdc | Lgor_1278 | Lgor_1082 | Hypothetical protein. | Pyruvate decarboxylase. | 0.685 |
Lgor_1796 | Lgor_0118 | Lgor_1796 | Lgor_0118 | Hypothetical protein. | Acid phosphatase, class B. | 0.544 |
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