STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpC_1Alkyl hydroperoxide reductase. (182 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase.
  
 
 0.948
ahpD
Alkyl hydroperoxide reductase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.927
dipZ
Cytochrome C biogenesis protein.
  
 0.770
ccmG
Cytochrome C biogenesis protein.
  
 0.719
Lgor_2586
Putative conjugative transfer protein TraF.
  
 0.719
resA
Thiol-disulfide oxidoreductase.
  
 0.719
Lgor_2585
Putative conjugative transfer protein TrbB.
   
 0.713
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.670
bcp-2
Bacterioferritin comigratory protein.
 
 
 0.668
oxyR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.660
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.