STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKGlutathione synthase, ribosomal protein S6 modification protein; Belongs to the RimK family. (302 aa)    
Predicted Functional Partners:
Lgor_3018
Succinylglutamate desuccinylase / aspartoacylase family protein.
 
     0.783
Lgor_1121
Secreted protein.
 
     0.748
ybdK-2
Glutamate-cysteine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.719
gshA
Glutamate--cysteine ligase.
    
 0.667
argF
Ornithine carbamoyltransferase.
    
  0.597
cphA_1
Cyanophycin synthetase.
    
 0.530
cphA_2
Cyanophycin synthetase.
    
 0.530
cphA_3
Cyanophycin synthetase.
    
 0.530
ypmQ
SCO1/SenC family transporter protein.
       0.517
ddlA
D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
     
 0.430
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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