Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_0165 | coxB | Lgor_0165 | Lgor_2088 | SURF1 family protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.957 |
| Lgor_0165 | coxC | Lgor_0165 | Lgor_2085 | SURF1 family protein. | Cytochrome c oxidase, subunit III. | 0.831 |
| Lgor_0165 | ctaA | Lgor_0165 | Lgor_0163 | SURF1 family protein. | Cytochrome c oxidase assembly protein. | 0.992 |
| Lgor_0165 | ctaB | Lgor_0165 | Lgor_0162 | SURF1 family protein. | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.978 |
| Lgor_0165 | petA | Lgor_0165 | Lgor_2309 | SURF1 family protein. | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.745 |
| Lgor_0165 | ypmQ | Lgor_0165 | Lgor_0161 | SURF1 family protein. | SCO1/SenC family transporter protein. | 0.802 |
| Lgor_2586 | coxB | Lgor_2586 | Lgor_2088 | Putative conjugative transfer protein TraF. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.865 |
| Lgor_2586 | ypmQ | Lgor_2586 | Lgor_0161 | Putative conjugative transfer protein TraF. | SCO1/SenC family transporter protein. | 0.826 |
| ccmG | coxB | Lgor_1817 | Lgor_2088 | Cytochrome C biogenesis protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.865 |
| ccmG | petA | Lgor_1817 | Lgor_2309 | Cytochrome C biogenesis protein. | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.509 |
| ccmG | ypmQ | Lgor_1817 | Lgor_0161 | Cytochrome C biogenesis protein. | SCO1/SenC family transporter protein. | 0.853 |
| coxB | Lgor_0165 | Lgor_2088 | Lgor_0165 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | SURF1 family protein. | 0.957 |
| coxB | Lgor_2586 | Lgor_2088 | Lgor_2586 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Putative conjugative transfer protein TraF. | 0.865 |
| coxB | ccmG | Lgor_2088 | Lgor_1817 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C biogenesis protein. | 0.865 |
| coxB | coxC | Lgor_2088 | Lgor_2085 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, subunit III. | 0.999 |
| coxB | ctaA | Lgor_2088 | Lgor_0163 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein. | 0.980 |
| coxB | ctaB | Lgor_2088 | Lgor_0162 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.992 |
| coxB | dipZ | Lgor_2088 | Lgor_0595 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C biogenesis protein. | 0.912 |
| coxB | petA | Lgor_2088 | Lgor_2309 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| coxB | resA | Lgor_2088 | Lgor_2950 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol-disulfide oxidoreductase. | 0.888 |
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