STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ybhR_2ABC transporter permease. (378 aa)    
Predicted Functional Partners:
ybhF_1
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
 
 0.983
ybhF_2
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
 
 0.964
Lgor_0183
Hemolysin D.
 
  
 0.875
macA_3
Hemolysin D.
 
  
 0.800
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
 
 
 0.679
Lgor_0181
Cyclic nucleotide-binding protein.
       0.636
ybhF_3
ABC transporter ElsE.
  
 
 0.592
ybhR_1
ABC transporter permease.
 
    
0.548
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 
  0.504
thiF_2
Thiazole biosynthesis adenylyltransferase ThiF.
  
    0.450
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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