STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cya_2Guanylate cyclase. (469 aa)    
Predicted Functional Partners:
gmr_2
Regulatory protein (GGDEF domain).
  
 0.982
cph2_5
Regulatory protein (GGDEF and EAL domains).
  
 0.966
arcB_4
Sensory histidine-kinase / response regulator.
  
 0.963
arcB_1
Sensory box histidine kinase/response regulator.
  
 0.963
letS_1
Legionella transmission sensor LetS.
   
 0.954
letS_2
Legionella transmission sensor LetS.
  
 0.952
dosC_1
Regulatory protein (GGDEF, PAS, PAC domains).
  
 0.930
cyaB_3
Guanylate/adenylate cyclase.
 
 
0.927
gmr_3
Sensory box (GGDEF/EAL domain) regulatory protein.
   
 0.885
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.866
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.