Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB_1 | arcB_4 | Lgor_2932 | Lgor_2075 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_1 | cph2_3 | Lgor_2932 | Lgor_0302 | Sensory box histidine kinase/response regulator. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.999 |
arcB_1 | cph2_5 | Lgor_2932 | Lgor_1215 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF and EAL domains). | 0.999 |
arcB_1 | dosC_1 | Lgor_2932 | Lgor_2218 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF, PAS, PAC domains). | 0.996 |
arcB_1 | gmr_2 | Lgor_2932 | Lgor_1047 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF domain). | 0.999 |
arcB_1 | gmr_3 | Lgor_2932 | Lgor_0346 | Sensory box histidine kinase/response regulator. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.989 |
arcB_1 | letS_1 | Lgor_2932 | Lgor_0314 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.999 |
arcB_1 | letS_2 | Lgor_2932 | Lgor_1065 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.999 |
arcB_1 | ycgG_1 | Lgor_2932 | Lgor_3237 | Sensory box histidine kinase/response regulator. | Regulatory protein (EAL domain). | 0.928 |
arcB_1 | ycgG_2 | Lgor_2932 | Lgor_1216 | Sensory box histidine kinase/response regulator. | Signal transduction protein (EAL/GGDEF domain protein). | 0.917 |
arcB_4 | arcB_1 | Lgor_2075 | Lgor_2932 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
arcB_4 | cph2_3 | Lgor_2075 | Lgor_0302 | Sensory histidine-kinase / response regulator. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.999 |
arcB_4 | cph2_5 | Lgor_2075 | Lgor_1215 | Sensory histidine-kinase / response regulator. | Regulatory protein (GGDEF and EAL domains). | 0.999 |
arcB_4 | dosC_1 | Lgor_2075 | Lgor_2218 | Sensory histidine-kinase / response regulator. | Regulatory protein (GGDEF, PAS, PAC domains). | 0.996 |
arcB_4 | gmr_2 | Lgor_2075 | Lgor_1047 | Sensory histidine-kinase / response regulator. | Regulatory protein (GGDEF domain). | 0.999 |
arcB_4 | gmr_3 | Lgor_2075 | Lgor_0346 | Sensory histidine-kinase / response regulator. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.988 |
arcB_4 | letS_1 | Lgor_2075 | Lgor_0314 | Sensory histidine-kinase / response regulator. | Legionella transmission sensor LetS. | 0.999 |
arcB_4 | letS_2 | Lgor_2075 | Lgor_1065 | Sensory histidine-kinase / response regulator. | Legionella transmission sensor LetS. | 0.999 |
arcB_4 | ycgG_1 | Lgor_2075 | Lgor_3237 | Sensory histidine-kinase / response regulator. | Regulatory protein (EAL domain). | 0.917 |
arcB_4 | ycgG_2 | Lgor_2075 | Lgor_1216 | Sensory histidine-kinase / response regulator. | Signal transduction protein (EAL/GGDEF domain protein). | 0.917 |
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