STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltCLysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
Lgor_0360
Outer membrane component of multidrug efflux pump.
 
     0.749
apxIB_2
Toxin secretion ABC transporter ATP-binding protein.
 
     0.731
cvaA
Putative membrane fusion protein.
 
     0.719
Lgor_0355
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.682
nuoL_2
NADH-ubiquinone oxidoreductase chain 5.
 
     0.668
Lgor_0353
Hypothetical protein.
 
     0.635
Lgor_0354
Nitrogen regulatory protein P-II.
 
    0.615
cynR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.560
Lgor_0361
Tryptophan-rich sensory protein.
       0.454
purK
Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.449
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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