Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lgor_0360Outer membrane component of multidrug efflux pump. (476 aa)    
Predicted Functional Partners:
cvaA
Putative membrane fusion protein.
 
  0.983
apxIB_2
Toxin secretion ABC transporter ATP-binding protein.
 
 
  0.975
Lgor_0355
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.848
gltC
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.842
Lgor_0353
Hypothetical protein.
 
     0.830
nuoL_2
NADH-ubiquinone oxidoreductase chain 5.
 
     0.764
Lgor_2111
Membrane-fusion protein AcrA.
  
  0.758
Lgor_2662
Ankyrin repeats (3 copies).
  
     0.751
Lgor_2480
Ankyrin repeats (3 copies).
  
     0.749
Lgor_0183
Hemolysin D.
   
  0.748
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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