Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_2029 | epsL | Lgor_2029 | Lgor_0963 | Phosphoserine phosphatase. | Putative sugar transferase EpsL. | 0.821 |
| Lgor_2029 | glyA | Lgor_2029 | Lgor_1925 | Phosphoserine phosphatase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.800 |
| Lgor_2029 | metB | Lgor_2029 | Lgor_1903 | Phosphoserine phosphatase. | Cystathionine beta-lyase. | 0.695 |
| Lgor_2029 | sdhL | Lgor_2029 | Lgor_0411 | Phosphoserine phosphatase. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.644 |
| Lgor_2029 | serC_1 | Lgor_2029 | Lgor_1960 | Phosphoserine phosphatase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.714 |
| Lgor_2029 | serC_2 | Lgor_2029 | Lgor_2692 | Phosphoserine phosphatase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.714 |
| Lgor_2029 | tdcB | Lgor_2029 | Lgor_1110 | Phosphoserine phosphatase. | L-threonine dehydratase catabolic TdcB. | 0.640 |
| budB | pykA | Lgor_0535 | Lgor_0848 | Acetolactate synthase; Belongs to the TPP enzyme family. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.662 |
| budB | sdhL | Lgor_0535 | Lgor_0411 | Acetolactate synthase; Belongs to the TPP enzyme family. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.667 |
| budB | tdcB | Lgor_0535 | Lgor_1110 | Acetolactate synthase; Belongs to the TPP enzyme family. | L-threonine dehydratase catabolic TdcB. | 0.789 |
| epsL | Lgor_2029 | Lgor_0963 | Lgor_2029 | Putative sugar transferase EpsL. | Phosphoserine phosphatase. | 0.821 |
| epsL | glyA | Lgor_0963 | Lgor_1925 | Putative sugar transferase EpsL. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.707 |
| epsL | metB | Lgor_0963 | Lgor_1903 | Putative sugar transferase EpsL. | Cystathionine beta-lyase. | 0.855 |
| epsL | sdhL | Lgor_0963 | Lgor_0411 | Putative sugar transferase EpsL. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.637 |
| epsL | tdcB | Lgor_0963 | Lgor_1110 | Putative sugar transferase EpsL. | L-threonine dehydratase catabolic TdcB. | 0.586 |
| gcvT | glyA | Lgor_0798 | Lgor_1925 | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.992 |
| gcvT | sdhL | Lgor_0798 | Lgor_0411 | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.729 |
| gcvT | tdcB | Lgor_0798 | Lgor_1110 | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | L-threonine dehydratase catabolic TdcB. | 0.604 |
| glyA | Lgor_2029 | Lgor_1925 | Lgor_2029 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Phosphoserine phosphatase. | 0.800 |
| glyA | epsL | Lgor_1925 | Lgor_0963 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Putative sugar transferase EpsL. | 0.707 |
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