STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (350 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.992
phhA
Phenylalanine-4-hydroxylase.
 
  
 0.929
Lgor_0427
Fumarylacetoacetate hydrolase.
 
  
 0.921
Lgor_0428
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.921
mccA
Acyl CoA carboxylase subunit alpha.
  
 
 0.835
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
  
 0.834
mdcE
Malonate decarboxylase subunit gamma.
  
 
 0.802
accD5_2
propionyl-CoA carboxylase subunit beta.
  
 
 0.802
Lgor_1350
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.802
Lgor_0655
acyl-CoA synthetase.
    
 0.759
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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