Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0477 | Lgor_0655 | Lgor_0477 | Lgor_0655 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
Lgor_0477 | aas | Lgor_0477 | Lgor_0083 | acyl-CoA synthetase. | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | 0.978 |
Lgor_0477 | cdsA | Lgor_0477 | Lgor_0034 | acyl-CoA synthetase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.763 |
Lgor_0477 | gpsA | Lgor_0477 | Lgor_0453 | acyl-CoA synthetase. | Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.766 |
Lgor_0477 | plsX | Lgor_0477 | Lgor_2719 | acyl-CoA synthetase. | Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.548 |
Lgor_0477 | plsY | Lgor_0477 | Lgor_1654 | acyl-CoA synthetase. | Transmembrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.888 |
Lgor_0655 | Lgor_0477 | Lgor_0655 | Lgor_0477 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
Lgor_0655 | aas | Lgor_0655 | Lgor_0083 | acyl-CoA synthetase. | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | 0.999 |
Lgor_0655 | cdsA | Lgor_0655 | Lgor_0034 | acyl-CoA synthetase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.767 |
Lgor_0655 | glpK | Lgor_0655 | Lgor_2695 | acyl-CoA synthetase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.502 |
Lgor_0655 | gpsA | Lgor_0655 | Lgor_0453 | acyl-CoA synthetase. | Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.858 |
Lgor_0655 | plsX | Lgor_0655 | Lgor_2719 | acyl-CoA synthetase. | Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.509 |
Lgor_0655 | plsY | Lgor_0655 | Lgor_1654 | acyl-CoA synthetase. | Transmembrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.795 |
aas | Lgor_0477 | Lgor_0083 | Lgor_0477 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | acyl-CoA synthetase. | 0.978 |
aas | Lgor_0655 | Lgor_0083 | Lgor_0655 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | acyl-CoA synthetase. | 0.999 |
aas | cdsA | Lgor_0083 | Lgor_0034 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.803 |
aas | glpD | Lgor_0083 | Lgor_2696 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.417 |
aas | glpK | Lgor_0083 | Lgor_2695 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.790 |
aas | gpsA | Lgor_0083 | Lgor_0453 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.774 |
aas | plsX | Lgor_0083 | Lgor_2719 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.808 |
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