Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tcmNO-methyltransferase. (335 aa)    
Predicted Functional Partners:
yhdE
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
      0.899
Lgor_0655
acyl-CoA synthetase.
 
  
 0.804
pksJ_1
Polyketide synthase, type I.
 
  
 0.658
pksL_4
Polyketide synthase.
  
  
 0.623
Lgor_2402
Oxidoreductase.
  
 
 0.618
zupT_1
Dioxygenase.
       0.561
Lgor_1279
Substrate of the Dot/Icm secretion system.
  
     0.529
ispA
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.529
Lgor_0721
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
  
     0.515
pdhB_1
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
     
  0.500
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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