STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufSSelenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (407 aa)    
Predicted Functional Partners:
nifU
NifU family FeS assembly SUF system protein.
 
 0.999
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
 
 
 0.997
Lgor_1518
Putative iron-sulpher cluster proteins NifU.
  
 0.995
sufD
Component of SufBCD complex.
 
 0.994
sufB
Cysteine desulfurase.
 
 0.994
Lgor_0058
Endonuclease/exonuclease/phosphatase family protein.
    
   0.921
Lgor_3234
Hypothetical protein.
    
   0.921
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.857
nsrR_1
Rrf2 family transporter protein.
    
  0.828
Lgor_0503
Metal-sulfur cluster biosynthetic enzyme.
 
 
 0.805
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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