STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_0516Hypothetical protein. (456 aa)    
Predicted Functional Partners:
pykA
Pyruvate kinase II; Belongs to the pyruvate kinase family.
   
    0.685
fabI_1
enoyl-ACP reductase.
       0.671
aprX
Subtilisin-like serine protease.
   
 
 0.436
Lgor_0517
Poly(3-hydroxybutyrate) depolymerase.
       0.433
pta_2
Phosphate acetyl/butaryl transferase.
       0.433
atpB_1
V-type ATPase subunit B.
       0.433
ntpD
V-type ATP synthase subunit D.
       0.433
Lgor_0521
V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
       0.433
ntpK
V-type ATP synthase subunit K.
       0.433
amiB
N-acetylmuramoyl-L-alanine amidase.
     
 0.429
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.