STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrbAFlavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family. (199 aa)    
Predicted Functional Partners:
xthA
Exodeoxyribonuclease III.
       0.791
exoA
Exodeoxyribonuclease.
       0.791
Lgor_0655
acyl-CoA synthetase.
    
  0.656
Lgor_1147
LysM domain-containing protein.
   
  
 0.621
dps1
Ferritin; Belongs to the Dps family.
   
  
 0.606
dps2
DNA-binding protein; Belongs to the Dps family.
   
  
 0.606
osmY
Lipoprotein.
   
    0.601
Lgor_1354
Hypothetical protein.
    
  0.588
Lgor_0944
Serine protein kinase.
   
    0.584
Lgor_1209
DsrE/DsrF-like family protein.
    
  0.577
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.