Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgor_06502,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. (238 aa)    
Predicted Functional Partners:
pksJ_1
Polyketide synthase, type I.
 
 0.995
pksL_4
Polyketide synthase.
 
 0.990
Lgor_0655
acyl-CoA synthetase.
  
 0.954
lgrD_2
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.946
lgrD_1
Peptide synthetase, non-ribosomal.
 
 
 0.915
pksL_1
Polyketide synthase.
 
 0.912
Lgor_0651
GH3 auxin-responsive promoter.
 
  
  0.900
bcp
Acetylpolyamine aminohydrolase.
  
 
  0.839
Lgor_1848
Hypothetical protein.
 
 
 0.829
Lgor_1583
Acyltransferase.
  
 0.823
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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