Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_1231 | bcsC | Lgor_1231 | Lgor_1232 | Hypothetical protein. | Cellulose synthase operon protein C precursor. | 0.783 |
| Lgor_1231 | sdaC | Lgor_1231 | Lgor_0668 | Hypothetical protein. | Serine transporter. | 0.543 |
| atpB_1 | sdaC | Lgor_0519 | Lgor_0668 | V-type ATPase subunit B. | Serine transporter. | 0.693 |
| bcsC | Lgor_1231 | Lgor_1232 | Lgor_1231 | Cellulose synthase operon protein C precursor. | Hypothetical protein. | 0.783 |
| bcsC | sdaC | Lgor_1232 | Lgor_0668 | Cellulose synthase operon protein C precursor. | Serine transporter. | 0.508 |
| cbpA | dnaK | Lgor_0392 | Lgor_1186 | DNA-binding protein DnaJ. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.999 |
| cbpA | gadB | Lgor_0392 | Lgor_2169 | DNA-binding protein DnaJ. | Sphingosine-1-phosphate lyase I. | 0.643 |
| cbpA | sdaC | Lgor_0392 | Lgor_0668 | DNA-binding protein DnaJ. | Serine transporter. | 0.604 |
| dacB_2 | sdaC | Lgor_0670 | Lgor_0668 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. | Serine transporter. | 0.521 |
| dnaJ | dnaK | Lgor_1187 | Lgor_1186 | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.999 |
| dnaJ | gadB | Lgor_1187 | Lgor_2169 | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | Sphingosine-1-phosphate lyase I. | 0.612 |
| dnaJ | sdaC | Lgor_1187 | Lgor_0668 | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | Serine transporter. | 0.604 |
| dnaK | cbpA | Lgor_1186 | Lgor_0392 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-binding protein DnaJ. | 0.999 |
| dnaK | dnaJ | Lgor_1186 | Lgor_1187 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.999 |
| dnaK | gadB | Lgor_1186 | Lgor_2169 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Sphingosine-1-phosphate lyase I. | 0.717 |
| dnaK | sdaC | Lgor_1186 | Lgor_0668 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Serine transporter. | 0.702 |
| gadB | cbpA | Lgor_2169 | Lgor_0392 | Sphingosine-1-phosphate lyase I. | DNA-binding protein DnaJ. | 0.643 |
| gadB | dnaJ | Lgor_2169 | Lgor_1187 | Sphingosine-1-phosphate lyase I. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.612 |
| gadB | dnaK | Lgor_2169 | Lgor_1186 | Sphingosine-1-phosphate lyase I. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.717 |
| gadB | sdaC | Lgor_2169 | Lgor_0668 | Sphingosine-1-phosphate lyase I. | Serine transporter. | 0.633 |
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