Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sdaCSerine transporter. (431 aa)    
Predicted Functional Partners:
dps1
Ferritin; Belongs to the Dps family.
    
   0.776
dps2
DNA-binding protein; Belongs to the Dps family.
    
   0.776
dacB_2
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
 
     0.566
Lgor_1231
Hypothetical protein.
  
     0.543
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.535
bcsC
Cellulose synthase operon protein C precursor.
  
     0.508
parB_1
Partition protein ParB; Belongs to the ParB family.
       0.501
bcsB
Cyclic di-GMP-binding protein precursor; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
 
   0.489
sdhL
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
  
 0.477
ribA-2
GTP cyclohydrolase II.
       0.454
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.