Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rmlA1Nucleotidyltransferase. (219 aa)    
Predicted Functional Partners:
Lgor_0684
Putative phosphotransferase.
 
 
 0.996
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.895
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.880
murB_1
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.861
algC
Phosphomannomutase.
 
 
 0.781
murB_2
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.777
ostA
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
     0.747
galU
Glucose-1-phosphate uridylyltransferase.
 
  
 0.739
Lgor_0211
3-beta hydroxysteroid dehydrogenase/isomerase.
  
 0.707
yeeZ
NAD-dependent epimerase/dehydratase.
  
 0.707
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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