Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
per1Beta-lactamase. (357 aa)    
Predicted Functional Partners:
Lgor_1699
Putative secreted esterase.
  
  
 0.592
ptpA_1
Prolyl oligopeptidase.
  
     0.577
pcpB
FAD dependent oxidoreductase.
       0.493
ampC_2
Beta-lactamase.
  
  
 0.488
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.486
Lgor_0750
Hypothetical protein.
       0.457
blaFEZ-1
Metallo-beta-lactamase L1 precursor.
  
   
 0.455
Lgor_0755
Hypothetical protein.
 
     0.453
dacB_1
D-Ala-D-Ala carboxypeptidase.
  
  
  0.437
Lgor_0455
Calcium-transporting ATPase.
  
     0.431
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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