STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpBFAD dependent oxidoreductase. (540 aa)    
Predicted Functional Partners:
ndoR
Xylene monooxygenase.
  
  
 0.814
Lgor_0655
acyl-CoA synthetase.
   
 
 0.744
Lgor_1728
Cytochrome P450.
  
 0.739
lgrD_2
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.736
yeeZ
NAD-dependent epimerase/dehydratase.
  
 
 0.723
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
    
 0.715
lgrD_1
Peptide synthetase, non-ribosomal.
  
  
 0.669
Lgor_1109
(2-pyrone-4,6-)dicarboxylic acid hydrolase.
  
  
  0.662
Lgor_2018
Hypothetical protein.
  
   
 0.661
Lgor_2826
Cytochrome P450.
  
 0.634
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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