STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_0777Hypothetical protein; N-terminal GNAT family acetyltransferase. (294 aa)    
Predicted Functional Partners:
Lgor_0778
Hypothetical protein.
       0.592
dotG_1
IcmE/DotG protein.
  
     0.587
dotA
Defect in organelle trafficking protein DotA.
  
     0.562
Lgor_1026
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.529
Lgor_3276
Spermidine synthase.
  
  
  0.497
Lgor_2114
Putative helicase/relaxase.
  
     0.469
Lgor_2222
Opacity protein-like surface antigen.
  
     0.467
Lgor_1072
Glycoprotease.
   
 0.461
Lgor_2755
Hypothetical protein.
  
     0.459
Lgor_1990
Polysaccharide deacetylase.
  
     0.447
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.