STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheW_1Chemotaxis signal transduction protein (cheW domain). (158 aa)    
Predicted Functional Partners:
cheA
Chemotaxis histidine kinase.
 
 0.999
mcp4
Chemotaxis signal transducer.
 
 0.997
cyaB_3
Guanylate/adenylate cyclase.
 
 0.967
cheR
Methyltransferase involved in chemotaxis (CheR domain).
 
 
 0.966
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.964
arcB_4
Sensory histidine-kinase / response regulator.
  
 0.946
arcB_1
Sensory box histidine kinase/response regulator.
  
 0.946
gmr_2
Regulatory protein (GGDEF domain).
  
 0.933
cheW_2
Chemotaxis signal transduction protein (cheW domain).
 
  
  0.920
arcB_2
Response regulator.
  
 0.913
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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