Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_0804Ras family GTPase. (307 aa)    
Predicted Functional Partners:
Lgor_0942
cNMP-binding protein.
  
 
 0.844
Lgor_3275
Rho GTPase (Miro-like).
  
   
 0.779
Lgor_0530
Ras family GTPase.
  
     0.772
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.744
Lgor_2228
Carrier protein.
  
     0.740
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
 
  0.725
Lgor_0476
Protein phosphatase 2C.
  
 
   0.688
Lgor_1053
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.674
Lgor_0455
Calcium-transporting ATPase.
  
  0.627
Lgor_1253
Hypothetical protein.
  
     0.625
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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