STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_0829O-Antigen ligase. (459 aa)    
Predicted Functional Partners:
Lgor_0830
Polysaccharide biosynthesis protein.
 
  
 0.945
ptk
Tyrosine-protein kinase ptk.
 
 
 0.888
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.823
kpsD
Polysialic acid transport protein KpsD precursor.
 
 
 0.813
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
 
 
  0.764
tuaA
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
 
 
 0.698
capM2
CapM protein, capsular polysaccharide biosynthesis.
 
 
  0.639
Lgor_0835
Glycosyl transferase group 1.
 
 
  0.637
thiF_2
Thiazole biosynthesis adenylyltransferase ThiF.
  
   
 0.624
lacA
Chloramphenicol acetyltransferase.
 
     0.580
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.