STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capM2CapM protein, capsular polysaccharide biosynthesis. (353 aa)    
Predicted Functional Partners:
tuaA
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
 
 
 0.845
ptk
Tyrosine-protein kinase ptk.
 
 
 0.828
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.765
kpsD
Polysialic acid transport protein KpsD precursor.
 
 
 0.754
epsL
Putative sugar transferase EpsL.
 
 
 0.678
Lgor_0830
Polysaccharide biosynthesis protein.
 
 
 0.643
Lgor_0829
O-Antigen ligase.
 
 
 0.641
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
 
     0.596
rmlA1
Nucleotidyltransferase.
 
 0.579
Lgor_0837
STAS domain protein.
 
     0.553
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.