STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_0868Outer membrane channel protein. (467 aa)    
Predicted Functional Partners:
bepE_4
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.957
Lgor_0866
Hypothetical protein.
 
     0.870
lssD
Secretion system protein D.
  
 0.693
emrA_3
Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.677
Lgor_1713
Thiamine kinase.
  
     0.640
apxIB_2
Toxin secretion ABC transporter ATP-binding protein.
 
 
 0.639
emrA_1
Multidrug efflux system.
  
 0.635
emrA_2
Multidrug efflux system.
  
 0.635
yiaV_2
Hemolysin D.
  
 0.635
ygaV
Transcriptional regulator, ArsR family.
       0.633
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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