Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mta_1Mercury resistance transcriptional regulator SkgA. (253 aa)    
Predicted Functional Partners:
cph2_5
Regulatory protein (GGDEF and EAL domains).
   
 0.619
mta_2
GTP cyclohydrolase.
  
  
 
0.600
dosC_1
Regulatory protein (GGDEF, PAS, PAC domains).
    
 0.581
gmr_2
Regulatory protein (GGDEF domain).
   
 0.558
gmr_3
Sensory box (GGDEF/EAL domain) regulatory protein.
    
 0.526
queF
GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
  
  
 
0.522
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.499
cph2_2
Regulatory protein (GGDEF and EAL domains).
    
  0.490
cph2_1
Inner membrane protein/sensory box protein LssE.
    
  0.490
arcB_4
Sensory histidine-kinase / response regulator.
    
 0.472
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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