Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_0944 | pepN_1 | Lgor_0944 | Lgor_0943 | Serine protein kinase. | Aminopeptidase. | 0.521 |
| cysK | ggt | Lgor_2129 | Lgor_2252 | Cystathionine beta-synthase. | Gamma-glutamyltranspeptidase. | 0.639 |
| cysK | glyA | Lgor_2129 | Lgor_1925 | Cystathionine beta-synthase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.716 |
| cysK | gshA | Lgor_2129 | Lgor_1330 | Cystathionine beta-synthase. | Glutamate--cysteine ligase. | 0.586 |
| cysK | metB | Lgor_2129 | Lgor_1903 | Cystathionine beta-synthase. | Cystathionine beta-lyase. | 0.991 |
| cysK | pepA | Lgor_2129 | Lgor_1101 | Cystathionine beta-synthase. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.609 |
| cysK | pepA_2 | Lgor_2129 | Lgor_1098 | Cystathionine beta-synthase. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.609 |
| cysK | pepN_1 | Lgor_2129 | Lgor_0943 | Cystathionine beta-synthase. | Aminopeptidase. | 0.605 |
| cysK | pepN_2 | Lgor_2129 | Lgor_2436 | Cystathionine beta-synthase. | Aminopeptidase. | 0.584 |
| ggt | cysK | Lgor_2252 | Lgor_2129 | Gamma-glutamyltranspeptidase. | Cystathionine beta-synthase. | 0.639 |
| ggt | gshB | Lgor_2252 | Lgor_1331 | Gamma-glutamyltranspeptidase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.694 |
| ggt | pepA | Lgor_2252 | Lgor_1101 | Gamma-glutamyltranspeptidase. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.597 |
| ggt | pepA_2 | Lgor_2252 | Lgor_1098 | Gamma-glutamyltranspeptidase. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.597 |
| ggt | pepN_1 | Lgor_2252 | Lgor_0943 | Gamma-glutamyltranspeptidase. | Aminopeptidase. | 0.585 |
| ggt | pepN_2 | Lgor_2252 | Lgor_2436 | Gamma-glutamyltranspeptidase. | Aminopeptidase. | 0.578 |
| glyA | cysK | Lgor_1925 | Lgor_2129 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Cystathionine beta-synthase. | 0.716 |
| glyA | metB | Lgor_1925 | Lgor_1903 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Cystathionine beta-lyase. | 0.653 |
| glyA | pepA | Lgor_1925 | Lgor_1101 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.581 |
| glyA | pepA_2 | Lgor_1925 | Lgor_1098 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.581 |
| glyA | pepN_1 | Lgor_1925 | Lgor_0943 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase. | 0.647 |
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