Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_0388 | Lgor_0389 | Lgor_0388 | Lgor_0389 | Diphosphomevalonate decarboxylase. | Mevalonate kinase. | 0.995 |
| Lgor_0388 | fni | Lgor_0388 | Lgor_0962 | Diphosphomevalonate decarboxylase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.864 |
| Lgor_0388 | ispA | Lgor_0388 | Lgor_1681 | Diphosphomevalonate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.729 |
| Lgor_0388 | ispB | Lgor_0388 | Lgor_0014 | Diphosphomevalonate decarboxylase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.729 |
| Lgor_0388 | mvaA | Lgor_0388 | Lgor_0380 | Diphosphomevalonate decarboxylase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.935 |
| Lgor_0389 | Lgor_0388 | Lgor_0389 | Lgor_0388 | Mevalonate kinase. | Diphosphomevalonate decarboxylase. | 0.995 |
| Lgor_0389 | fni | Lgor_0389 | Lgor_0962 | Mevalonate kinase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.808 |
| Lgor_0389 | mvaA | Lgor_0389 | Lgor_0380 | Mevalonate kinase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.925 |
| fni | Lgor_0388 | Lgor_0962 | Lgor_0388 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Diphosphomevalonate decarboxylase. | 0.864 |
| fni | Lgor_0389 | Lgor_0962 | Lgor_0389 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate kinase. | 0.808 |
| fni | guaA | Lgor_0962 | Lgor_1544 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.862 |
| fni | ispA | Lgor_0962 | Lgor_1681 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.697 |
| fni | ispB | Lgor_0962 | Lgor_0014 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.597 |
| fni | mvaA | Lgor_0962 | Lgor_0380 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.797 |
| fni | pta_1 | Lgor_0962 | Lgor_3222 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphate acetyl/butaryl transferase. | 0.501 |
| fni | pta_2 | Lgor_0962 | Lgor_0518 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphate acetyl/butaryl transferase. | 0.501 |
| fni | pykA | Lgor_0962 | Lgor_0848 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.565 |
| fni | rpsA | Lgor_0962 | Lgor_2689 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.533 |
| guaA | fni | Lgor_1544 | Lgor_0962 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.862 |
| guaA | pta_1 | Lgor_1544 | Lgor_3222 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Phosphate acetyl/butaryl transferase. | 0.518 |
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