Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
btrRAminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family. (392 aa)    
Predicted Functional Partners:
epsL
Putative sugar transferase EpsL.
 
 
 0.986
dapH
Chloramphenicol acetyltransferase.
 
  
  0.891
capD_2
Polysaccharide biosynthesis protein.
 
 
 0.865
capD1
Polysaccharide biosynthesis protein CapD.
  
 
 0.822
Lgor_0966
ABC-2 type transporter.
     
 0.782
wzt
ABC transporter of LPS O-antigen.
     
 0.748
tuaA
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
 
 
 0.739
lgrD_1
Peptide synthetase, non-ribosomal.
  
 0.738
Lgor_0987
Glycosyltransferase, group 1 family.
 
  
 0.696
Lgor_0211
3-beta hydroxysteroid dehydrogenase/isomerase.
  
 
 0.669
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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