STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capLProtein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (431 aa)    
Predicted Functional Partners:
wecB_3
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 0.999
wecB_1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 0.981
wecB_2
UDP-N-acetylglucosamine 2-epimerase.
 
 
 0.943
Lgor_0987
Glycosyltransferase, group 1 family.
 
 
 0.890
epsL
Putative sugar transferase EpsL.
  
 
 0.855
arnB_1
AHBA synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.855
capD1
Polysaccharide biosynthesis protein CapD.
  
 
 0.847
fepE
Ferric enterobactin transport protein FepE.
  
  
 0.791
mraY
phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
 0.729
Lgor_0211
3-beta hydroxysteroid dehydrogenase/isomerase.
  
 
 0.725
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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