STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuACMP-N-acetlyneuraminic acid synthetase. (228 aa)    
Predicted Functional Partners:
spsE
Putative N-acetylneuramic acid synthetase (NeuB).
 
 0.987
Lgor_0977
Putative polysaccharide biosynthesis protein.
 
   
 0.910
speG
N-Acyltransferase (NAT).
 
  
 0.865
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
 
  0.724
wecB_3
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.709
capD1
Polysaccharide biosynthesis protein CapD.
 
  
 0.688
arnB_1
AHBA synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.620
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.612
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family.
    
  0.599
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family.
    
  0.576
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.