Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgor_0977Putative polysaccharide biosynthesis protein. (373 aa)    
Predicted Functional Partners:
speG
N-Acyltransferase (NAT).
 
 0.990
spsE
Putative N-acetylneuramic acid synthetase (NeuB).
 
 
 0.987
neuA
CMP-N-acetlyneuraminic acid synthetase.
 
   
 0.915
arnB_1
AHBA synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.859
capD1
Polysaccharide biosynthesis protein CapD.
 
   
 0.787
Lgor_1610
Putative acetyltransferase YhhY.
  
 
 0.511
btrR
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.449
arnB_2
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.449
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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