STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolGMyo-inositol 2-dehydrogenase. (338 aa)    
Predicted Functional Partners:
iolE
Myo-inositol catabolism protein iolE.
 
 
 0.998
iolD
Malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
 
  
 0.979
iolCB
IolC/IolB transferase kinase protein.
 
 
 0.978
galP
Sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 
 0.879
suhB
Inositol monophosphatase.
    
 0.869
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.691
Lgor_1109
(2-pyrone-4,6-)dicarboxylic acid hydrolase.
    
 0.636
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.626
wecB_3
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.598
btrR
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.555
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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