Lgor_1074 protein (Fluoribacter gormanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Lgor_1074

Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)

Predicted Functional Partners:

mdh

0.937

Lgor_1072

0.869

yoaA

0.869

lpxK_1

0.845

fadH

0.812

pta_2

0.785

pta_1

0.785

ndoR

0.749

sdhA_2

0.687

pdhB_1

0.684

Your Current Organism:

Fluoribacter gormanii

NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lgor_1072	Lgor_1074	Lgor_1072	Lgor_1074	Glycoprotease.	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.869
Lgor_1072	lpxK_1	Lgor_1072	Lgor_1071	Glycoprotease.	tetraacyldisaccharide-1-P-4'-kinase; Belongs to the UPF0434 family.	0.845
Lgor_1072	yoaA	Lgor_1072	Lgor_1073	Glycoprotease.	ATP-dependent helicase.	0.873
Lgor_1074	Lgor_1072	Lgor_1074	Lgor_1072	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Glycoprotease.	0.869
Lgor_1074	fadH	Lgor_1074	Lgor_1659	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	2,4-dienoyl-CoA reductase.	0.812
Lgor_1074	lpxK_1	Lgor_1074	Lgor_1071	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	tetraacyldisaccharide-1-P-4'-kinase; Belongs to the UPF0434 family.	0.845
Lgor_1074	mdh	Lgor_1074	Lgor_1656	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.	0.937
Lgor_1074	ndoR	Lgor_1074	Lgor_2387	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Xylene monooxygenase.	0.749
Lgor_1074	pdhB_1	Lgor_1074	Lgor_1142	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Pyruvate/2-oxoglutarate dehydrogenase subunit E1.	0.684
Lgor_1074	pta_1	Lgor_1074	Lgor_3222	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Phosphate acetyl/butaryl transferase.	0.785
Lgor_1074	pta_2	Lgor_1074	Lgor_0518	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Phosphate acetyl/butaryl transferase.	0.785
Lgor_1074	sdhA_2	Lgor_1074	Lgor_2267	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.687
Lgor_1074	yoaA	Lgor_1074	Lgor_1073	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	ATP-dependent helicase.	0.869
fadH	Lgor_1074	Lgor_1659	Lgor_1074	2,4-dienoyl-CoA reductase.	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.812
fadH	mdh	Lgor_1659	Lgor_1656	2,4-dienoyl-CoA reductase.	Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.	0.576
fadH	ndoR	Lgor_1659	Lgor_2387	2,4-dienoyl-CoA reductase.	Xylene monooxygenase.	0.998
fadH	sdhA_2	Lgor_1659	Lgor_2267	2,4-dienoyl-CoA reductase.	Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.914
lpxK_1	Lgor_1072	Lgor_1071	Lgor_1072	tetraacyldisaccharide-1-P-4'-kinase; Belongs to the UPF0434 family.	Glycoprotease.	0.845
lpxK_1	Lgor_1074	Lgor_1071	Lgor_1074	tetraacyldisaccharide-1-P-4'-kinase; Belongs to the UPF0434 family.	Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.845
lpxK_1	yoaA	Lgor_1071	Lgor_1073	tetraacyldisaccharide-1-P-4'-kinase; Belongs to the UPF0434 family.	ATP-dependent helicase.	0.845

page 1 of 3

Server load: medium (42%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About