Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pepPProline aminopeptidase P II. (435 aa)    
Predicted Functional Partners:
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase.
     
 0.899
Lgor_1128
Hypothetical protein; Belongs to the UPF0149 family.
 
   
 0.881
visC
Oxidoreductase with FAD/NAD(P)-binding domain protein.
     
 0.870
Lgor_3018
Succinylglutamate desuccinylase / aspartoacylase family protein.
    
 0.838
zapA
Cell division protein ZapA.
     
 0.783
etfA
Electron transfer flavoprotein, alpha subunit.
    
  0.649
fadH
2,4-dienoyl-CoA reductase.
    
 0.625
hisS
histidyl-tRNA synthetase.
  
  
 0.615
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.603
thiO
Thiamine biosynthesis oxidoreductase ThiO.
    
  0.558
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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