Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adcAcetoacetate decarboxylase. (245 aa)    
Predicted Functional Partners:
bdhA
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.991
Lgor_1158
Alpha-beta hydrolase family transporter esterase.
 
     0.959
acsA
acetyl-CoA synthetase.
     
  0.861
yngG
hydroxymethylglutaryl-CoA lyase.
     
  0.861
motA2
Flagellar motor protein MotA.
       0.785
motB_1
Flagellar motor protein MotB.
       0.773
Lgor_1156
Hypothetical protein.
       0.675
Lgor_1848
Hypothetical protein.
  
  
  0.501
bphI
4-hydroxy-2-oxovalerate aldolase.
     
  0.483
Lgor_0740
Short chain dehydrogenase.
  
  
  0.469
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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