STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artJ_1Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (245 aa)    
Predicted Functional Partners:
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 
 0.905
artM
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
 
 0.884
arcB_4
Sensory histidine-kinase / response regulator.
   
 0.759
arcB_1
Sensory box histidine kinase/response regulator.
   
 0.759
letS_1
Legionella transmission sensor LetS.
    
 0.606
gmr_2
Regulatory protein (GGDEF domain).
    
 0.602
letS_2
Legionella transmission sensor LetS.
   
 0.591
pheA_3
2-methylcitrate synthase.
     
  0.563
glnE
Glutamine synthetase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transducti [...]
       0.556
cheA
Chemotaxis histidine kinase.
    
 0.492
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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