STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_1183Esterase. (344 aa)    
Predicted Functional Partners:
aas
Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase.
    
  0.626
phbC_2
PHA synthase.
  
     0.567
phbC_3
PHA synthase.
  
     0.566
phbC_1
PHA synthase.
  
     0.564
Lgor_2493
Hypothetical protein.
  
     0.522
phbC_4
Poly-beta-hydroxybutyrate synthase.
  
     0.447
Lgor_2244
PHB/PHA accumulation regulator DNA-binding domain protein.
 
     0.434
lvgA
Virulence protein LvgA.
    
   0.434
Lgor_1739
Alpha-beta hydrolase family transporter esterase.
  
     0.428
adc
Acetoacetate decarboxylase.
 
     0.408
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.