Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0076 | Lgor_1147 | Lgor_0076 | Lgor_1147 | Fimbrial assembly protein (PilN). | LysM domain-containing protein. | 0.430 |
Lgor_0076 | pilC_2 | Lgor_0076 | Lgor_2443 | Fimbrial assembly protein (PilN). | Pilus assembly protein PilC. | 0.414 |
Lgor_0076 | pilM | Lgor_0076 | Lgor_1222 | Fimbrial assembly protein (PilN). | Tfp pilus assembly protein, ATPase PilM. | 0.918 |
Lgor_0076 | pilO | Lgor_0076 | Lgor_1224 | Fimbrial assembly protein (PilN). | Tfp pilus assembly protein PilO. | 0.863 |
Lgor_0076 | pilP | Lgor_0076 | Lgor_1225 | Fimbrial assembly protein (PilN). | Tfp pilus assembly protein PilP. | 0.856 |
Lgor_0076 | pilQ | Lgor_0076 | Lgor_1226 | Fimbrial assembly protein (PilN). | Type IV pilus (Tfp) assembly protein PilQ. | 0.850 |
Lgor_1147 | Lgor_0076 | Lgor_1147 | Lgor_0076 | LysM domain-containing protein. | Fimbrial assembly protein (PilN). | 0.430 |
Lgor_1147 | pilC_2 | Lgor_1147 | Lgor_2443 | LysM domain-containing protein. | Pilus assembly protein PilC. | 0.614 |
Lgor_1147 | pilE_2 | Lgor_1147 | Lgor_0629 | LysM domain-containing protein. | Type-IV pilin. | 0.756 |
Lgor_1147 | pilE_3 | Lgor_1147 | Lgor_1067 | LysM domain-containing protein. | Tfp pilus assembly protein, major type IV pilin class A; Belongs to the N-Me-Phe pilin family. | 0.447 |
Lgor_1147 | pilM | Lgor_1147 | Lgor_1222 | LysM domain-containing protein. | Tfp pilus assembly protein, ATPase PilM. | 0.930 |
Lgor_1147 | pilN | Lgor_1147 | Lgor_1223 | LysM domain-containing protein. | Tfp pilus assembly protein PilN. | 0.932 |
Lgor_1147 | pilO | Lgor_1147 | Lgor_1224 | LysM domain-containing protein. | Tfp pilus assembly protein PilO. | 0.931 |
Lgor_1147 | pilP | Lgor_1147 | Lgor_1225 | LysM domain-containing protein. | Tfp pilus assembly protein PilP. | 0.932 |
Lgor_1147 | pilQ | Lgor_1147 | Lgor_1226 | LysM domain-containing protein. | Type IV pilus (Tfp) assembly protein PilQ. | 0.993 |
Lgor_1147 | pilZ_2 | Lgor_1147 | Lgor_2710 | LysM domain-containing protein. | Type 4 fimbrial biogenesis protein PilZ. | 0.777 |
pilC_2 | Lgor_0076 | Lgor_2443 | Lgor_0076 | Pilus assembly protein PilC. | Fimbrial assembly protein (PilN). | 0.414 |
pilC_2 | Lgor_1147 | Lgor_2443 | Lgor_1147 | Pilus assembly protein PilC. | LysM domain-containing protein. | 0.614 |
pilC_2 | pilE_3 | Lgor_2443 | Lgor_1067 | Pilus assembly protein PilC. | Tfp pilus assembly protein, major type IV pilin class A; Belongs to the N-Me-Phe pilin family. | 0.464 |
pilC_2 | pilM | Lgor_2443 | Lgor_1222 | Pilus assembly protein PilC. | Tfp pilus assembly protein, ATPase PilM. | 0.813 |
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