Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
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Co-expression
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[Homology]
Score
bcsZEndoglucanase precursor. (365 aa)    
Predicted Functional Partners:
bcsB
Cyclic di-GMP-binding protein precursor; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
  
 0.983
bcsA
Cellulose synthase catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
 
 
 0.981
chiD
Chitinase.
     
 0.918
Lgor_1231
Hypothetical protein.
 
   
 0.877
bcsC
Cellulose synthase operon protein C precursor.
 
     0.837
Lgor_1299
IS2 repressor TnpA.
 
  
 0.707
chiA1
Chitinase A1 precursor.
    
  0.558
ybbD
N-acetyl-beta-glucosaminidase.
     
 0.523
nagZ
Beta N-acetyl-glucosaminidase.
     
 0.523
Lgor_2517
Glycosyl hydrolase.
     
 0.523
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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