Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0470 | Lgor_1088 | Lgor_0470 | Lgor_1088 | Hypothetical protein. | L-gulono-gamma-lactone oxidase. | 0.749 |
Lgor_0470 | Lgor_1151 | Lgor_0470 | Lgor_1151 | Hypothetical protein. | CAAX amino terminal protease self- immunity. | 0.760 |
Lgor_0470 | Lgor_1275 | Lgor_0470 | Lgor_1275 | Hypothetical protein. | LphB. | 0.770 |
Lgor_0470 | Lgor_1356 | Lgor_0470 | Lgor_1356 | Hypothetical protein. | Putative Acetyltransferase, GNAT family. | 0.760 |
Lgor_0470 | Lgor_2112 | Lgor_0470 | Lgor_2112 | Hypothetical protein. | Outer membrane efflux protein. | 0.690 |
Lgor_0470 | Lgor_2363 | Lgor_0470 | Lgor_2363 | Hypothetical protein. | Hypothetical protein. | 0.734 |
Lgor_0470 | Lgor_2778 | Lgor_0470 | Lgor_2778 | Hypothetical protein. | Hypothetical protein. | 0.754 |
Lgor_0470 | iraA | Lgor_0470 | Lgor_0403 | Hypothetical protein. | Small-molecule methyltransferase IraA. | 0.770 |
Lgor_0470 | secA_2 | Lgor_0470 | Lgor_1032 | Hypothetical protein. | Coiled-coil protein. | 0.765 |
Lgor_1088 | Lgor_0470 | Lgor_1088 | Lgor_0470 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.749 |
Lgor_1088 | Lgor_1151 | Lgor_1088 | Lgor_1151 | L-gulono-gamma-lactone oxidase. | CAAX amino terminal protease self- immunity. | 0.730 |
Lgor_1088 | Lgor_1275 | Lgor_1088 | Lgor_1275 | L-gulono-gamma-lactone oxidase. | LphB. | 0.753 |
Lgor_1088 | Lgor_1356 | Lgor_1088 | Lgor_1356 | L-gulono-gamma-lactone oxidase. | Putative Acetyltransferase, GNAT family. | 0.636 |
Lgor_1088 | Lgor_2112 | Lgor_1088 | Lgor_2112 | L-gulono-gamma-lactone oxidase. | Outer membrane efflux protein. | 0.672 |
Lgor_1088 | Lgor_2363 | Lgor_1088 | Lgor_2363 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.763 |
Lgor_1088 | Lgor_2778 | Lgor_1088 | Lgor_2778 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.707 |
Lgor_1088 | iraA | Lgor_1088 | Lgor_0403 | L-gulono-gamma-lactone oxidase. | Small-molecule methyltransferase IraA. | 0.748 |
Lgor_1088 | secA_2 | Lgor_1088 | Lgor_1032 | L-gulono-gamma-lactone oxidase. | Coiled-coil protein. | 0.748 |
Lgor_1151 | Lgor_0470 | Lgor_1151 | Lgor_0470 | CAAX amino terminal protease self- immunity. | Hypothetical protein. | 0.760 |
Lgor_1151 | Lgor_1088 | Lgor_1151 | Lgor_1088 | CAAX amino terminal protease self- immunity. | L-gulono-gamma-lactone oxidase. | 0.730 |
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