STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoKAlkaline phosphatase. (539 aa)    
Predicted Functional Partners:
udk_2
Uridine kinase.
    
  0.697
ppnK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.691
Lgor_0574
Putative Heparan-alpha-glucosaminide N-acetyltransferase.
  
  
  0.670
Lgor_0080
Hypothetical protein.
    
 0.629
Lgor_1327
Dot/Icm T4SS effector.
       0.588
Lgor_2911
HEAT repeat protein.
  
 
  0.535
ptpA
Prolyl tripeptidyl peptidase precursor.
  
     0.483
mecI
Methicillin resistance regulatory protein mecI.
 
     0.430
waaM
Lipid A biosynthesis acyltransferase.
     
  0.420
eptB
Phosphoethanolamine transferase EptB.
     
  0.420
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.