Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_1341 | metI | Lgor_1341 | Lgor_1343 | Coiled coil domain-containing protein. | D-methionine transport system permease protein MetI. | 0.450 |
| Lgor_1341 | metN | Lgor_1341 | Lgor_1344 | Coiled coil domain-containing protein. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.450 |
| Lgor_1341 | metQ | Lgor_1341 | Lgor_1342 | Coiled coil domain-containing protein. | D-methionine-binding lipoprotein MetQ. | 0.485 |
| Lgor_1345 | metI | Lgor_1345 | Lgor_1343 | Hypothetical protein. | D-methionine transport system permease protein MetI. | 0.568 |
| Lgor_1345 | metN | Lgor_1345 | Lgor_1344 | Hypothetical protein. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.568 |
| Lgor_1345 | metQ | Lgor_1345 | Lgor_1342 | Hypothetical protein. | D-methionine-binding lipoprotein MetQ. | 0.514 |
| fadH | metQ | Lgor_1659 | Lgor_1342 | 2,4-dienoyl-CoA reductase. | D-methionine-binding lipoprotein MetQ. | 0.406 |
| lolD | macB_1 | Lgor_0432 | Lgor_2110 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | 0.605 |
| lolD | metN | Lgor_0432 | Lgor_1344 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.426 |
| lolD | metQ | Lgor_0432 | Lgor_1342 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | D-methionine-binding lipoprotein MetQ. | 0.532 |
| macB_1 | lolD | Lgor_2110 | Lgor_0432 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.605 |
| macB_1 | metN | Lgor_2110 | Lgor_1344 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.436 |
| macB_1 | metQ | Lgor_2110 | Lgor_1342 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | D-methionine-binding lipoprotein MetQ. | 0.532 |
| metI | Lgor_1341 | Lgor_1343 | Lgor_1341 | D-methionine transport system permease protein MetI. | Coiled coil domain-containing protein. | 0.450 |
| metI | Lgor_1345 | Lgor_1343 | Lgor_1345 | D-methionine transport system permease protein MetI. | Hypothetical protein. | 0.568 |
| metI | metN | Lgor_1343 | Lgor_1344 | D-methionine transport system permease protein MetI. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| metI | metQ | Lgor_1343 | Lgor_1342 | D-methionine transport system permease protein MetI. | D-methionine-binding lipoprotein MetQ. | 0.999 |
| metK | metN | Lgor_1189 | Lgor_1344 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.661 |
| metK | metQ | Lgor_1189 | Lgor_1342 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | D-methionine-binding lipoprotein MetQ. | 0.455 |
| metN | Lgor_1341 | Lgor_1344 | Lgor_1341 | DL-methionine transporter subunit, ATP-binding component of ABC superfamily protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Coiled coil domain-containing protein. | 0.450 |
page 1 of 2