STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menBenoyl-CoA hydratase. (258 aa)    
Predicted Functional Partners:
yngG
hydroxymethylglutaryl-CoA lyase.
 
 0.996
Lgor_1350
Acetyl/propionyl-CoA carboxylase, beta subunit.
 
 
  0.994
mccA
Acyl CoA carboxylase subunit alpha.
 0.977
Lgor_1353
acyl-CoA dehydrogenase.
 
 0.963
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.958
arcB_4
Sensory histidine-kinase / response regulator.
   
 0.945
arcB_1
Sensory box histidine kinase/response regulator.
   
 0.945
letS_2
Legionella transmission sensor LetS.
   
 0.914
Lgor_1351
Hypothetical protein.
       0.858
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.811
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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